Event Schedule

Bioinformatics Week workshops and lectures will be held on the Stanford University Medical Center Campus.

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Schedule Legend
NCBI Workshops
EBI Workshops
UCSC Genome Workshop
Stanford Microarray Workshop
Lane Medical Library

Time   Fairchild Auditorium   Workshop1 - M112   Workshop2 - M202
8:00 - 9:00
  Check-in: Pick up badges and conference materials      
   
9:00 - 10:00

Intro to EBI

       
       
10:00 - 11:00

UniProt/IntAct Overview

Lecturer
Sandra Orchard

 
 
11:00 - 12:00  

PRIDE Overview

Lecturer
Phil Jones

   

 

       
12:00 - 1:00          

Proteomics Workshop - UniProt, InterPro IntAct

Lecturers

Jennifer McDowall, Sandra Orchard, Phil Jones

     
1:00 - 2:00  

Ensembl / BioMart Overview

Lecturer
Xose Fernandez

 

PRIDE Workshop

Lecturer
Phil Jones

 
     
2:00 - 3:00  

InterPro Overview

Lecturers

Jennifer McDowall,

 

Ensembl/BioMart Workshop

Lecturer
Xose Fernandez

   
     

Proteomics Workshop - UniProt, InterPro IntAct

Lecturers

Jennifer McDowall, Sandra Orchard, Phil Jones

3:00 - 4:00        
4:00 - 5:00  

 

   
     
5:00 - 6:00  

DAS BioMart Overview

Lecturer
Xose Fernandez

 

     

Time   Fairchild Auditorium   Workshop1 - M112   Workshop2 - M202
8:00 - 9:00
         
9:00 - 10:00

Array Express Overview

Lecturer
Helen Parkinson

     

Proteomics Workshop - UniProt, InterPro IntAct

Lecturers

Jennifer McDowall, Sandra Orchard, Phil Jones

 

10:00 - 11:00

SOAP Web Services Demonstration

Lecturer
Phil Jones

 

Array Express Workshop

Lecturer
Helen Parkinson

 
11:00 - 12:00

Macromolecular Structure Database

Lecturer
Sameer Velankar

     
   
   
12:00 - 1:00  

 

       
       
1:00 - 2:00  

Gene Ontology Demonstration

Lecturer
TBA

  Macromolecular Structure Database Workshop
Sameer Velankar

 

 

Proteomics Workshop - UniProt, InterPro IntAct

Lecturers

Jennifer McDowall, Sandra Orchard, Phil Jones

2:00 - 3:00  

Reactome Overview

Lecturer
David Croft

   
 
3:00 - 3:30      

Reactome Workshop

Lecturer
David Croft

 
3:30 - 5:00  

SRS Demonstration

Lecturer
TBA

 
     
5:00 - 6:00          

 Time Fairchild Auditorium Workshop1 - M112   Workshop2 - M202
8:00 - 9:00
         
9:00 - 12:00
Field Guide to NCBI GenBank and NCBI Molecular Biology Resources
Lecture by
Peter Cooper

       
12:00 - 1:00            
     

1:00 - 3:00

     

Field Guide Hands-On Session 1

 

Field Guide Hands-On Session 2

     
     
     
3:00 - 5:00          
5:00 - 6:00      

 

   

Time Lecture Hall - M104 Workshop1 - M112  
8:00 - 9:00
         
   
9:00 - 12:00

UCSC Genome Group

Overview of Genome Resources at UCSC - Bob Kuhn

Comparative Genomics and Variation- Daryl Thomas

Support for Power Users. - Heather Trumbower

 

UCSC Genome Group

Hands-On Sessions

   
   
   
   
   
   
12:00 - 1:00            
     
1:00 - 2:30  

NCBI Mini-Course
Identification of Disease Genes
Lecture by
Medha Bhagwat

  Consultation with UCSC Genome Experts  

 

 

     
     
2:30 - 3:30  

Summarizing Candidate Gene Data: The Surprising Power of SOAPed-Up Excel


Lecture by
Yannick Pouliot

  Hands-On Workshop
Identification of Disease Genes
   
     
3:30 - 4:00  

Pathway Databases

Lecture by
Alexander Shearer
SRI

   
4:00 - 5:00          
     
5:00 - 6:00      

 

   
       

Time
Time Lecture Hall - M104   Workshop1 - M112   Workshop2 - M202
8:00 - 9:00
     

 

 
   
9:00 - 10:30

NCBI Mini-Course

Correlation of Disease Genes to Phenotpyes
Lecture by
Medha Bhagwat

     
   
   
10:30 - 12:00

Stanford Microarray Database Group


Accessing and Analyzing Public Data with the Stanford Microarray Database

Lecture by
Catherine Ball

  Hands-On
Correlation of Disease Genes to Phenotypes
   
   
   
12:00 - 1:00            
     
1:00 - 2:30  

NCBI Mini-Course

Making Sense of DNA & Protein Sequences
Lecture by
Medha Bhagwat

     
     
     
2:30 - 5:00      

Hands-On

Making Sense of DNA & Protein Sequences

 

 

     
     
         
     
5:00 - 5:30        
Last Updated: March 26, 2006